Publications

Dan Bumbarger, PhD
Abteilung 4 Evolutionsbiologie
Max-Planck-Institut für Entwicklungsbiologie
Tübingen, Germany 72076

daniel.bumbarger@tuebingen.mpg.de

Twitter: @DanBumbarger;

Images on Flickr

Publications:

D.J. Bumbarger, M. Riebesell, C. Rödelsperger and R.J. Sommer. 2013. System-wide Rewiring Underlies Behavioral Differences in Predatory and Bacterial-Feeding Nematodes. Cell 152,109-119

Kolotuev, I., D.J. Bumbarger, M. Labouesse and Y. Schwab.  2012. Targeted ultramicrotomy: a valuable tool for correlated light and electron microscopy of small model organisms. Methods Cell Biol 111, 203-222

Sommer, R.J. and D.J. Bumbarger. 2012. Nematode model systems in evolution and development. Wiley Interdisciplinary Reviews: Developmental Biology

Ragsdale, E.J., M. Mundo-Ocampo, D.J. Bumbarger and J.G. Baldwin. 2011. Cervidellus sonorensis n. sp. (Nematoda: Cephalobidae) from the desert of Anza-Borrego, CA, USA. Nematology 13, 607-617

Yi, B., D.J. Bumbarger and R.J. Sommer. 2009. Genetic evidence for pax-3 function in myogenesis in the nematode Pristionchus pacificus. Evol Dev 11, 669-679

Bumbarger, D.J., S. Wijeratne, C. Carter, J. Crum, M.H. Ellisman and J.G. Baldwin. 2009. Three-dimensional reconstruction of the amphid sensilla in the microbial feeding nematode, Acrobeles complexus (nematoda: Rhabditida). J Comp Neurol  512, 271-281

Bumbarger, D.J., J. Crum, M.H. Ellisman and J.G. Baldwin. 2007. Three-dimensional fine structural reconstruction of the nose sensory structures of Acrobeles complexus compared to Caenorhabditis elegans (Nematoda: Rhabditida). J Morphol 268, 649-663

Holovachov O., M. Mundo-Ocampo, S. Boström and Bumbarger D.J. 2007. Three known species of the genus Cervidellus Thorne, 1937 (Rhabditida: Cephalobidae) from the south-western part of North America. J Nematode Morphol Syst 10, 49-61

Bumbarger, D.J., J. Crum, M.H. Ellisman and J.G. Baldwin. 2006. Three-dimensional reconstruction of the nose epidermal cells in the microbial feeding nematode, Acrobeles complexus (Nematoda: Rhabditida). J Morphol 267, 1257-1272

Nadler, S.A., P. De Ley, M. Mundo-Ocampo, A.B. Smythe, P. Stock, D.J. Bumbarger, B.J. Adams, I.T. De Ley, O. Holovachov and J.G. Baldwin. 2006. Phylogeny of Cephalobina (Nematoda): Molecular evidence for recurrent evolution of probolae and incongruence with traditional classifications. Mol Phylogenet Evol 40, 696-711

Waceke,  J.W., Bumbarger D.J., M. Mundo-Ocampo, S.A. Subbotin and J.G. 2005. Baldwin. Zeldia spannata n. Sp. (nematoda: Cephalobdidae) from the mojave desert, california. J Nematode Morphol Syst  8, 57-67

Baldwin J.G., E.J. Ragsdale and D.J. Bumbarger. 2004. Revised hypothesis for phylogenetic homology of the stomatostylet in tylenchid nematodes. Nematology 6, 623-632

Poiras L., J.G. Baldwin, M. Mundo-Ocampo and D.J. Bumbarger. 2002. Nothacrobeles borregi n. Sp (nematoda : Cephalobidae) from anza borrego, california and N. laticollaris (de Ley & Vandebroek, 1992) n. comb. Nematology 4, 865-874

Roush, S.A., and D.J. Bumbarger. 1998. Odonata of the Beaver Creek Wetlands, Greene County, Ohio: A preliminary survey. Ohio J Sci 98, 59-60.

Resources

Comparative Connectomics Network Browser. http://www.pristionchus.org/connectomics

Pristionchus pacificus image stacks on Open Connectome: http://www.openconnectomeproject.org/#!pristionchus-pacificus/c1qb3

Invited Presentations

10/19/2013    TBA. ETH, Zürich, Switzerland. 

10/9/2013      Comparative Connectomics: mapping synaptic connectivity to examine nervous system structure and function. EMBL, Heidelberg, Germany.

26/09/2013    TBA. Max Planck Institute of Cell Biology and Genetics. Dresden, Germany.

3/20/2013              System-wide Rewiring Underlies Behavioral Differences in Predatory and Bacterial-Feeding Nematodes. National Institutes of Health, Bethesda, Maryland.

3/19/2013              System-wide Rewiring Underlies Behavioral Differences in Predatory and Bacterial-Feeding Nematodes. HHMI Janelia Farm, Ashburn, Virginia.

1/30/2013         Comparing Nematode Connectomes. Institute of Molecular Pathology, Vienna, Austria.

4/24/2012         Comparing Connectomes: Graph theoretical comparison of networks of identified neurons in nematodes. European Neuroscience Institute, Göttingen, Germany

2/6/2012          Dense neural circuit reconstruction and graph theoretical analysis of nematode nervous systems. Zoologisches InstituteTierphysiologie, Köln, Germany

6/27/2011         Comparative Connectomics: Synaptic Connectivity in the nematodes Caenorhabditis elegans and Pristionchus pacificus. Department of Nematology, University of California, Riverside, California.

3/11/2011         Comparative Connectomics: Synaptic connectivity in the nematodes Caenorhabditis elegans and Pristionchus pacificus. Institute of Neuroinformatics, Zürich, Switzerland

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